removePatternsFromGeneSets: Remove entries matching a vector of patterns from a list of...
In CBIIT/geneSetPathwayAnalysis: geneSetPathwayAnalysis
View source: R/removePatternsFromGeneSets.R
removePatternsFromGeneSets R Documentation
Remove entries matching a vector of patterns from a list of vectors
Description
Remove entries matching a vector of patterns from a list of vectors
Usage
removePatternsFromGeneSets(geneSets, patterns, verbose = FALSE)
Arguments
geneSets
a list of vectors (e.g. gene sets)
patterns
a vector of patterns for grepl()
verbose
a boolean whether to show debugging output
Value
the gene sets (list of vectors) without entries matching patterns
Examples
tmp <- list(a=c("abc", "def", "deg", "ghi"), b=c("def", "deg", "ijk"))
removePatternsFromGeneSets(tmp, "def", TRUE)
CBIIT/geneSetPathwayAnalysis documentation built on Sept. 25, 2024, 2:07 a.m.
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View source: R/removePatternsFromGeneSets.R
| removePatternsFromGeneSets | R Documentation |
Remove entries matching a vector of patterns from a list of vectors
Description
Remove entries matching a vector of patterns from a list of vectors
Usage
removePatternsFromGeneSets(geneSets, patterns, verbose = FALSE)
Arguments
geneSets |
a list of vectors (e.g. gene sets) |
patterns |
a vector of patterns for grepl() |
verbose |
a boolean whether to show debugging output |
Value
the gene sets (list of vectors) without entries matching patterns
Examples
tmp <- list(a=c("abc", "def", "deg", "ghi"), b=c("def", "deg", "ijk"))
removePatternsFromGeneSets(tmp, "def", TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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