topologyCheck: Compare trees to clade structure
In CMWbio/subTreeCheckR: weavR: Windowed Evolutionary Analysis and Visualisation in R.
Description
Usage
Arguments
Details
Value
Description
Identifies trees discordant with a tree topology
Usage
1
topologyCheck(trees, cladeStr)
Arguments
trees
multiphy or list of phy.
Trees to test for clade structure specified in cladeStr
cladeStr
data.frame. Clade structure of the tree.
Details
checks a all trees for a provided clade structure
Value
list of trees in phy format containing all discordant trees.
CMWbio/subTreeCheckR documentation built on May 26, 2019, 6:41 a.m.
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Description Usage Arguments Details Value
Description
Identifies trees discordant with a tree topology
Usage
1 | topologyCheck(trees, cladeStr)
|
Arguments
trees |
|
cladeStr |
|
Details
checks a all trees for a provided clade structure
Value
list of trees in phy format containing all discordant trees.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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