Man pages for CenterForStatistics-UGent/reconsi
Resampling Collapsed Null Distributions for Simultaneous Inference
| binStats | Bin the test statistic into equally sized bins |
| calcWeights | Obtain weights as posterior probabilities to calculate the... |
| estNormal | Fast estimation of mean and standard deviation of a normal... |
| estP0 | Estimate the fraction of true null hypotheses. |
| getApproxCovar | Obtain a null covariance matrix of binned test statistics |
| getC1prop | Find the dependence pat C1 of the approximate covariance... |
| getFdr | Calculate tail-area (Fdr) and local (fdr) false discovery... |
| getG0 | Obtain the consensus null |
| getTestStats | A function to calculate observed and permuation z-statistics... |
| getTstat | A function to obtain a t-test statistic efficiently. For... |
| plotApproxCovar | Plot an approximation of the correlation structure of the... |
| plotCovar | Plot an the corvariance matrix of the test statistics... |
| plotNull | Plot the obtained null distribution along with a histogram of... |
| ptEdit | A custom function to calculate the distribution function of... |
| qtEdit | A custom function to calculate the quantile function of the... |
| quantCorrect | Correct quantiles by not returning 0 or 1 |
| reconsi | Perform simultaneous inference through collapsed resampling... |
| rowMultiply | A function to efficiently row multiply a a-by-b matrix by a... |
| stabExp | A function to numerically stabilize an exponentiation. For... |
| testDAA | A function to test for differential absolute abundance on a... |
| Vandeputte | Microbiomes of Crohn's disease patients and healthy controls |
