met: A data set containing the clinical meta data of the subjects...
In CharlieCarpenter/tidy.micro: A Pipeline For Microbiome Analysis And Visualization
Description
Usage
Format
Source
Description
Infants who required mechanical ventilation had tracheal aspirates samples collected at 7, 14, and 21 days of age (+/- 48 hours). Infants who were mechanically ventilated and had at least one tracheal aspirate collected were included in this study. Subjects were required to be enrolled within 7 days of age. Bacterial profiles were determined by broad-range amplification and sequence analysis of 16S rRNA genes
Usage
1
Format
A 74x8 data.frame
study_idA character vector of study IDs
weightA numeric vector of infant birth weights (Kg)
genderAn integer vector. 1 = M, 2 = F
gestational_ageA numeric vector of gestational age in weeks
mom_ethncty_2A numeric vector; 0 = Hispanic or Latino, 1 = Non Hispanic or Latino
bpd1A factor; BPD severity
dayA numeric vector; days of life at time of sequencing
LibA character vector of sequencing library names
Source
https://doi.org/10.1371/journal.pone.0170120
CharlieCarpenter/tidy.micro documentation built on Jan. 19, 2020, 6:28 p.m.
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Description Usage Format Source
Description
Infants who required mechanical ventilation had tracheal aspirates samples collected at 7, 14, and 21 days of age (+/- 48 hours). Infants who were mechanically ventilated and had at least one tracheal aspirate collected were included in this study. Subjects were required to be enrolled within 7 days of age. Bacterial profiles were determined by broad-range amplification and sequence analysis of 16S rRNA genes
Usage
1 |
Format
A 74x8 data.frame
study_idA character vector of study IDs
weightA numeric vector of infant birth weights (Kg)
genderAn integer vector. 1 = M, 2 = F
gestational_ageA numeric vector of gestational age in weeks
mom_ethncty_2A numeric vector; 0 = Hispanic or Latino, 1 = Non Hispanic or Latino
bpd1A factor; BPD severity
dayA numeric vector; days of life at time of sequencing
LibA character vector of sequencing library names
Source
https://doi.org/10.1371/journal.pone.0170120
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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