format-pdmpModel-method: Format a PDMP for pretty printing.

In CharlotteJana/pdmpsim: Simulate Piecewise Deterministic Markov Processes

Description

Give important information about a pdmpModel in one character string. This method is used internally to generate default filenames or plot titles.

Usage

## S4 method for signature 'pdmpModel'
format(x, begin = NULL, end = NULL,
  short = TRUE, slots = c("parms", "init", "times"), sep, collapse)

Arguments

x	an object of class pdmpModel or one of its subclasses.
begin	a character string that is pasted at the beginning.
end	a character string that is pasted at the end.
short	logical. If TRUE, a shorter version without space characters will be returned (useful to generate filenames). Defaults to TRUE.
slots	a vector specifying the names of all slots that shall be pasted to the string. ' The default is c("parms", "init", "times"). Supported slots are "descr", "parms", "init", "times" and "discStates".
sep	a character string to separate the names and values of slots that are vectors or lists (e. g. "times" or "parms"). It defaults to "=" if short is TRUE and to " = " if short is FALSE.
collapse	a character string to separate the slots. It defaults to "___" if short is TRUE and to ". " if short is FALSE.

Examples

data("toggleSwitch")
format(toggleSwitch, begin = "ToggleSwitch__", end = ".rda")
format(toggleSwitch, begin = paste0(descr(toggleSwitch), ": "), short=FALSE)
parms(toggleSwitch) <- list()
cat(format(toggleSwitch, short = FALSE, collapse = ".\n",
           slots = c("init", "times", "discStates"),
           begin = "A model without parameters:\n"))

CharlotteJana/pdmpsim documentation built on July 2, 2019, 5:37 a.m.