plot_model_selection: Plot model selection to choose number optimal number of...

In ChristofSeiler/CytoGLMM: Conditional Differential Analysis for Flow and Mass Cytometry Experiments

Plot model selection to choose number optimal number of clusters

Description

Plot model selection to choose number optimal number of clusters

Usage

plot_model_selection(fit, k = NULL)

Arguments

fit	A cytoflexmix class
k	Number of clusters

Value

cowplot object

Examples

set.seed(23)
df <- generate_data()
protein_names <- names(df)[3:12]
df <- dplyr::mutate_at(df, protein_names, function(x) asinh(x/5))
mix_fit <- CytoGLMM::cytoflexmix(df,
                                 protein_names = protein_names,
                                 condition = "condition",
                                 group = "donor",
                                 ks = 1:2)
plot_model_selection(mix_fit)

ChristofSeiler/CytoGLMM documentation built on April 21, 2023, 3:38 a.m.