report_qc_word_site: Quality control for site data
In ChuanHong/phase1.1.qc.test: Quality control for 4CE Phase1.1 data

Description Usage Arguments Author(s) Examples

View source: R/report_qc_word_site.R

Create the QC report in word file

1	report_qc_word_site(dat.DailyCounts, dat.ClinicalCourse, dat.Demographics, dat.Diagnoses, dat.Labs, dat.Medications, nm.report.file, icd.list, lab.range, site.nm)

`dat.DailyCounts`	the csv data file for DailyCounts
`dat.ClinicalCourse`	the csv data file for ClinicalCourse
`dat.Demographics`	the csv data file for Demographics
`dat.Diagnoses`	the csv data file for Diagnoses
`dat.Labs`	the csv data file for Labs
`dat.Medications`	the csv data file for Medications
`nm.report.file`	the directory and file naem for the output report
`icd.list`	the list of icd codes
`lab.range`	the range of each lab for detecting the lab unit issue
`site.nm`	the siteID (e.g., "MGB")

Chuan Hong

library("phase1.1.qc.test")
data("icd.list")
data("lab.range")
dir.input="~/4ce_data/input/"
nm.report.file=paste0("phase1.1.qc.report.", site.nm,".doc")
site.nm="RIVHS"
report_qc_word_site(dir.input, nm.report.file, icd.list, lab.range, site.nm)