Files in ClemensKohl/APL
Association Plots

.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
.lintr
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md R/CA.R R/apl.R R/constructor.R R/convert.R R/generic_methods.R R/import_packages.R R/plot.R R/utils-pipe.R README.md
_pkgdown.yml
inst/CITATION
inst/python/python_svd.py
man/apl.Rd man/apl_coords.Rd man/apl_ggplot.Rd man/apl_plotly.Rd man/apl_score.Rd man/apl_topGO.Rd man/as.cacomp.Rd man/as.list-cacomp-method.Rd man/ca_3Dplot.Rd man/ca_biplot.Rd man/ca_coords.Rd man/cacomp-class.Rd man/cacomp.Rd man/cacomp_names.Rd man/cacomp_slot.Rd man/check_cacomp.Rd man/comp_std_residuals.Rd man/elbow_method.Rd
man/figures/fig_AP.png
man/is.empty.Rd man/pick_dims.Rd man/pipe.Rd man/plot_enrichment.Rd man/recompute.Rd man/rm_zeros.Rd man/runAPL.Rd man/run_APL.Rd man/run_cacomp.Rd man/scree_plot.Rd man/show.cacomp.Rd man/subset_dims.Rd man/var_rows.Rd tests/testthat.R tests/testthat/test-CA.R tests/testthat/test-apl.R tests/testthat/test-convert.R
tests/testthat/testdata/AP_coordinates/example1/AP_coordinates_genes.txt
tests/testthat/testdata/AP_coordinates/example1/AP_coordinates_samples.txt
tests/testthat/testdata/AP_coordinates/example1/gene_ranking.txt
tests/testthat/testdata/AP_coordinates/example1/genes_order.txt
tests/testthat/testdata/AP_coordinates/example2/AP_coordinates_genes.txt
tests/testthat/testdata/AP_coordinates/example2/AP_coordinates_samples.txt
tests/testthat/testdata/AP_coordinates/example2/gene_ranking.txt
tests/testthat/testdata/AP_coordinates/example2/genes_order.txt
tests/testthat/testdata/AP_coordinates/example3/AP_coordinates_genes.txt
tests/testthat/testdata/AP_coordinates/example3/AP_coordinates_samples.txt
tests/testthat/testdata/AP_coordinates/example3/gene_ranking.txt
tests/testthat/testdata/AP_coordinates/example3/genes_order.txt
tests/testthat/testdata/AP_coordinates/input_data.txt
tests/testthat/testdata/AP_coordinates/notes.txt
tests/testthat/testdata/countries.rda
tests/testthat/testdata/input_data.tsv
tests/testthat/testdata/smoke.rda
tests/testthat/testdata/smoke_scRNAseq.rda
vignettes/.gitignore
vignettes/APL.Rmd
ClemensKohl/APL documentation built on May 25, 2024, 3:15 p.m.