diffEst: Estimates a single diffusion model via fast-dm.

Description Usage Arguments Value

Description

Estimates a single diffusion model via fast-dm.

Usage

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diffEst(pid, dataDir, logDir, baseCtl, returnResult = F,
  writeResult = T, df = NULL, varNames = NULL,
  fastDmLoc = "./fast-dm", stdOutLoc = NULL, saveMode = "a+", ...)

Arguments

pid

The file prefix on the ".dat" file to process.

dataDir

The directory containing data files to process.

logDir

The directory to save log files to.

baseCtl

A character string containing the basic control file without a load or log statement.

returnResult

If TRUE (not default), a dataframe with 1 row is returned containing the results of the estimation.

writeResult

If TRUE (default) the result is written to a .lst file in the logDir.

df

Dataframe to process data from. Currently not tested.

varNames

Character vector of variable names to use from df.

fastDmLoc

Path to the fast-dm executable, including the names of the executable.

stdOutLoc

A filename to save output to. Default is to not save output.

saveMode
...

Other parameters to pass to system(). Note that intern is already set according to whether stdOutLoc is provided.

Value

If


Cmell/diffR documentation built on Feb. 11, 2020, 3:13 p.m.