#' Filter the eBird data by date
#'
#' Define a filter for the eBird Basic Dataset (EBD) based on a range of dates.
#' This function only defines the filter and, once all filters have been
#' defined, [auk_filter()] should be used to call AWK and perform the
#' filtering.
#'
#' @param x `auk_ebd` or `auk_sampling` object; reference to file created by
#' [auk_ebd()] or [auk_sampling()].
#' @param date character or date; date range to filter by, provided either as a
#' character vector in the format `"2015-12-31"` or a vector of Date objects.
#' To filter on a range of dates, regardless of year, use `"*"` in place of
#' the year.
#'
#' @details To select observations from a range of dates, regardless of year,
#' the wildcard `"*"` can be used in place of the year. For example, using
#' `date = c("*-05-01", "*-06-30")` will return observations from May and June
#' of *any year*. When using wildcards, dates can wrap around the year end.
#'
#' This function can also work with on an `auk_sampling` object if the user only
#' wishes to filter the sampling event data.
#'
#' @return An `auk_ebd` object.
#' @export
#' @family filter
#' @examples
#' system.file("extdata/ebd-sample.txt", package = "auk") %>%
#' auk_ebd() %>%
#' auk_date(date = c("2010-01-01", "2010-12-31"))
#'
#' # alternatively, without pipes
#' ebd <- auk_ebd(system.file("extdata/ebd-sample.txt", package = "auk"))
#' auk_date(ebd, date = c("2010-01-01", "2010-12-31"))
#'
#' # the * wildcard can be used in place of year to select dates from all years
#' system.file("extdata/ebd-sample.txt", package = "auk") %>%
#' auk_ebd() %>%
#' # may-june records from all years
#' auk_date(date = c("*-05-01", "*-06-30"))
#'
#' # dates can also wrap around the end of the year
#' system.file("extdata/ebd-sample.txt", package = "auk") %>%
#' auk_ebd() %>%
#' # dec-jan records from all years
#' auk_date(date = c("*-12-01", "*-01-31"))
auk_date <- function(x, date) {
UseMethod("auk_date")
}
#' @export
auk_date.auk_ebd <- function(x, date) {
# checks
assertthat::assert_that(
length(date) == 2,
is.character(date) || assertthat::is.date(date)
)
# check for wildcard in year
has_wildcard <- stringr::str_detect(date, "^\\*-[0-9]{1,2}-[0-9]{1,2}")
if (all(has_wildcard)) {
# temporarily replace wildcard with 2016
date <- stringr::str_replace(date, "^\\*", "2016")
} else if (all(!has_wildcard)) {
assertthat::assert_that(date[1] <= date[2])
} else {
stop("Cannot mix wildcard dates with non-wildcard dates.")
}
# convert to date object, then format as ISO standard date format
date <- format(as.Date(date), "%Y-%m-%d")
assertthat::assert_that(
all(!is.na(date)),
date[1] >= "1850-01-01",
date[2] >= "1850-01-01"
)
# define filter
if (all(has_wildcard)) {
x$filters$date <- stringr::str_replace(date, "^2016", "*")
attr(x$filters$date, "wildcard") <- TRUE
attr(x$filters$date, "wrap") <- (date[1] > date[2])
} else {
x$filters$date <- date
attr(x$filters$date, "wildcard") <- FALSE
attr(x$filters$date, "wrap") <- FALSE
}
return(x)
}
#' @export
auk_date.auk_sampling <- function(x, date) {
auk_date.auk_ebd(x, date)
}
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