PlotChannelAbf: Plot channel data of abf objects.

In Crystal-YWu/abftools: ABF Tools: Toolbox for Visualising and Analysing Electrophysiology ABF2 Data

Description

AbfPlotChannel() is a unified wrapper to abf_plot_td(), it is capable of plotting multiple abf object facetted by id, multiple channels facetted by channel.

When printing the returned plot with a large number of abf objects, it can be very slow. It is recommended to use AbfPeekChannel() for previewing and plot tuning.

Usage

PlotChannelAbf(abf, intv = NULL, channel = GetAllChannels(abf),
  episode = GetAvailEpisodes(abf), concat_epi = FALSE, cursor = NULL,
  time_unit = "tick", colour = max(nEpi(abf)) > 1L,
  auto_zoom = FALSE, title = NULL, ...)

PeekChannelAbf(abf, intv = NULL, channel = 1L, sample_ratio = 100L,
  cursor = NULL, time_unit = "tick", colour = TRUE,
  auto_zoom = FALSE, title = NULL, ...)

Arguments

abf	an abf object/a list of abf objects
intv	an INDEX intv to sample abf.
channel	channels to plot.
episode	episodes to group.
concat_epi	wheter to concatenate all episodes.
cursor	add indicative cursors to plot.
time_unit	time unit for X axis.
colour	wheter to plot in coloured mode.
auto_zoom	wheter to zoom into area focused by cursor.
title	add title to the plot.
...	passed to MeltAbf().

Value

a ggplot object.

Crystal-YWu/abftools documentation built on May 10, 2019, 8:22 a.m.