R/afd_test_dt.R

In DMU-lilab/CancerGenomics: Some useful tools for cancer genome processing developed by Li lab

#' 1000000 Allele Frequency in WBC and Tumor
#'
#' A dataset containing the AF of 1000000 position
#' afd_test_dt. The variables are as follows:
#' * `chr`: Chromosome
#' * `pos`: Position
#' * `ref`: Reference base
#' * `alt.x`: Alt base in WBC
#' * `DP.x`: Depth in WBC
#' * `FREQ_1.x`: Allele frequency in WBC
#' * `alt.y`: Alt base in tumor
#' * `DP.y`: Depth in tumor
#' * `FREQ_1.y`: Allele frequency in tumor
#' @docType data
#'
#' @usage data(afd_test_dt)
#'
#' @format A data table with 1000000 rows and 9 variables
"afd_test_dt"