Files in DanieleBizzarri/MiMIR

Metabolomics-Based Models for Imputing Risk

LICENSE.md NEWS.md R/datasets.R R/launchApp.R R/predictors_functions.R R/utils.R README.Rmd README.md inst/shinyApp/lib/libraries.R inst/shinyApp/markdown/Rshiny_markdown.Rmd inst/shinyApp/markdown/Rshiny_markdown_no_pheno.Rmd inst/shinyApp/server.R inst/shinyApp/tabs/tab_about/server_about.R inst/shinyApp/tabs/tab_about/ui_about.R inst/shinyApp/tabs/tab_accuracy/server_accuracy.R inst/shinyApp/tabs/tab_accuracy/ui_accuracy.R inst/shinyApp/tabs/tab_accuracy_scores/server_accuracy_scores.R inst/shinyApp/tabs/tab_accuracy_scores/ui_accuracy_scores.R inst/shinyApp/tabs/tab_calibration/server_calibration.R inst/shinyApp/tabs/tab_calibration/ui_calibration.R inst/shinyApp/tabs/tab_distributions/server_distributions.R inst/shinyApp/tabs/tab_distributions/ui_distributions.R inst/shinyApp/tabs/tab_distributions_scores/server_distributions_scores.R inst/shinyApp/tabs/tab_distributions_scores/ui_distributions_scores.R inst/shinyApp/tabs/tab_download/server_download.R inst/shinyApp/tabs/tab_download/ui_download.R inst/shinyApp/tabs/tab_heatmaps/server_heatmaps.R inst/shinyApp/tabs/tab_heatmaps/ui_heatmaps.R inst/shinyApp/tabs/tab_metabolites/server_metabolites.R inst/shinyApp/tabs/tab_metabolites/ui_metabolites.R inst/shinyApp/tabs/tab_phenotypes/server_phenotypes.R inst/shinyApp/tabs/tab_phenotypes/ui_phenotypes.R inst/shinyApp/tabs/tab_qc/server_qc.R inst/shinyApp/tabs/tab_qc/ui_qc.R inst/shinyApp/tabs/tab_scores_tables/server_scores_tables.R inst/shinyApp/tabs/tab_scores_tables/ui_scores_tables.R inst/shinyApp/tabs/tab_surro_tables/server_surro_tables.R inst/shinyApp/tabs/tab_surro_tables/ui_surro_tables.R inst/shinyApp/tabs/tab_upload/server_upload.R inst/shinyApp/tabs/tab_upload/ui_upload.R inst/shinyApp/ui.R inst/shinyApp/www/App_mimir_logo.pdf man/Ahola_Olli_betas.Rd man/BBMRI_hist.Rd man/BBMRI_hist_plot.Rd man/BBMRI_hist_scaled.Rd man/BMI_LDL_eGFR.Rd man/CVD_score_betas.Rd man/LOBOV_accuracies.Rd man/MANUAL.pdf man/MOLEPI_LCBC_header.Rd man/MetaboWAS.Rd man/NA_message.Rd man/PARAM_metaboAge.Rd man/PARAM_surrogates.Rd man/QCprep.Rd man/QCprep_surrogates.Rd man/acc_LOBOV.Rd man/activateButtn.Rd man/apply.fit.Rd man/apply.fit_surro.Rd man/apply.scale.Rd man/binarize_all_pheno.Rd man/c21.Rd man/calculate_surrogate_scores.Rd man/calib_data_frame.Rd man/calibration_surro.Rd man/comp.CVD_score.Rd man/comp.T2D_Ahola_Olli.Rd man/comp.mort_score.Rd man/comp_covid_score.Rd man/cor_assoc.Rd man/covid_betas.Rd man/do_metabowas.Rd man/find_BBMRI_names.Rd man/get.p.Rd man/get.s.Rd man/getECE.Rd man/getMCE.Rd man/getvol.Rd man/hist_plots.Rd man/hist_plots_mortality.Rd man/impute_miss.Rd man/is.sym.Rd man/kapmeier_scores.Rd man/loading.Rd man/loading_spin.Rd man/metabo_names_translator.Rd man/metabolites_subsets.Rd man/model_coeff_heat.Rd man/mort_betas.Rd man/multi_hist.Rd man/pheno_barplots.Rd man/phenotypes_names.Rd man/plattCalib_evaluation.Rd man/plattCalibration.Rd man/plot_corply.Rd man/plot_na_heatmap.Rd man/plotly_NA_message.Rd man/predictions_surrogates.Rd man/prep_data_COVID_score.Rd man/prep_met_for_scores.Rd man/rendertable.Rd man/report.dim.Rd man/resort.on.p.Rd man/resort.on.s.Rd man/roc_surro.Rd man/roc_surro_subplots.Rd man/scatterplot_predictions.Rd man/startApp.Rd man/subset_metabolites_overlap.Rd man/subset_samples_miss.Rd man/subset_samples_sd.Rd man/subset_samples_sd_surrogates.Rd man/subset_samples_zero.Rd man/synthetic_metabolic_dataset.Rd man/synthetic_phenotypic_dataset.Rd man/ttest_scores.Rd man/ttest_surrogates.Rd