NEWS.md

In DavisLaboratory/vissE: Visualising Set Enrichment Analysis Results

version 1.10.0

• Fixed bug where the wrong IDF was loaded for analysis.

version 1.6.0

• Added informative error messages. Improved edge case handling.

version 1.4.0

• Added the adjusted rand index as a measure of gene-set overlap (now the default measure of overlap).
• Added feature to only plot gene-sets that are marked in the plotMsigNetwork function.
• Added function to identify and prioritise gene-set clusters (findMsigClusters)

version 1.2.0

• Added weighting to text-mining analysis. Word clouds can now incorporate statistics.
• Network plotting now performed using ggraph.
• Removal of excessive warnings produced when performing text-mining.
• Added PPI exploration of clusters

version 1.0.0

• submitted to bioconductor

DavisLaboratory/vissE documentation built on Jan. 31, 2024, 5:02 a.m.