GG_heatmap: Heatmap correlation matrix with ggplot2

In Deleetdk/kirkegaard: kirkegaard

Heatmap correlation matrix with ggplot2

Description

Heatmap correlation matrix with ggplot2

Usage

GG_heatmap(
  data,
  add_values = T,
  reorder_vars = T,
  digits = 2,
  font_size = 4,
  color_label = "Correlation",
  legend_position = c(0.4, 0.7),
  short_x_labels = F,
  axis_labels_clean_func = str_clean,
  dodge_x_labels = 1,
  min_n = 0,
  pairwise_n = NULL,
  pairwise_p = NULL,
  cross_out_nonsig = F,
  p_sig = 0.01,
  remove_diag = F
)

Arguments

data	Data frame or a matrix
add_values	Whether to add the correlation sizes as text to plot
reorder_vars	Whether to reorder variables so strongly related ones are close to each other
digits	How many digits to print when plotting them
font_size	If correlation values are plotted, their size
color_label	Which label to use for the color scale legend
legend_position	Position of the legend. Sometimes you may need to move it a bit
short_x_labels	Adds integers to the y axis labels, and replaces the x labels with the same integers. Useful when there are many variables.
axis_labels_clean_func	A function to clean the labels with, typically to remove underscores. NULL means disable.
dodge_x_labels	How much to dodge the x labels. Useful when there are many variables.
min_n	Minimum number of observations to include a correlation
pairwise_n	Pairwise number of observations. If not given, it is computed from the data.
pairwise_p	Pairwise p-values. If not given, it is computed from the data unless data is a matrix.
cross_out_nonsig	Cross out non-significant correlations
p_sig	Significance level for cross out
remove_diag	Remove diagonal values

Value

a ggplot2 object

Deleetdk/kirkegaard documentation built on June 8, 2025, 4:09 a.m.