API for DikshantPradhan/FluxCouplingTools
| Global functions | |
|---|---|
| GRB_ecoli_falcon_model | Man page Source code |
| GRB_ecoli_model | Man page Source code |
| GRB_flux_coupling_raptor_wrapper | Man page Source code |
| GRB_generate_falcon_model | Man page Source code |
| GRB_generate_pair_list | Source code |
| GRB_generate_set_list | Source code |
| GRB_generate_set_lists_cluster | Man page Source code |
| GRB_get_rxn_idx | Man page Source code |
| GRB_maximize | Man page Source code |
| GRB_mutans_falcon_model | Man page Source code |
| GRB_mutans_model | Man page Source code |
| GRB_pao_falcon_model | Man page Source code |
| GRB_pao_model | Man page Source code |
| GRB_yeast_falcon_model | Man page Source code |
| GRB_yeast_model | Man page Source code |
| add_exch_rxns_to_model | Man page Source code |
| char_to_str | Source code |
| check_all_sets_for_containing | Source code |
| check_set_list_for_deletion | Source code |
| check_sets_for_containing | Man page Source code |
| check_sets_for_deletion | Source code |
| clean_rxn_names_in_set | Man page Source code |
| combine_tables | Man page Source code |
| compare_sets | Man page Source code |
| convert_sybil_to_gurobi | Man page Source code |
| convert_sybil_to_lp | Source code |
| core_rxn_id | Source code |
| coupling_matrix_from_coupling_vector_list | Man page Source code |
| extract_logical_from_base | Source code |
| fill_coupling_matrix | Source code |
| fill_coupling_matrix_from_sets | Man page Source code |
| find_all_sets_for_rxn | Source code |
| find_composing_sets | Man page Source code |
| find_gpr_paths | Source code |
| flux_coupling_raptor | Man page Source code |
| full_coupling_matrix_from_coupling_vector_list | Source code |
| gene_set_from_rxn_set | Man page Source code |
| generate_exch_rxn | Source code |
| generate_falcon_model | Man page Source code |
| generate_gpr | Man page Source code |
| get_PAO_model | Man page Source code |
| get_all_gpr_paths | Source code |
| get_blocked | Source code |
| get_containing_set_idx | Man page Source code |
| get_ecoli_model | Man page Source code |
| get_genes_from_react_id | Man page Source code |
| get_list_of_sets_from_mtx | Man page Source code |
| get_mutans_model | Man page Source code |
| get_mutans_model_w_obj | Source code |
| get_paths_from_gpr | Source code |
| get_set_idx | Man page Source code |
| get_yeast_maranas_model | Man page Source code |
| gprRule_to_idx | Source code |
| identify_intermediate_uncoupled | Man page Source code |
| insert_into_list | Source code |
| isolate_gene_matrix | Man page Source code |
| isolate_rxn_matrix | Man page Source code |
| map_elements_to_set | Source code |
| optimize_rxn | Man page Source code |
| optimize_set_elements | Source code |
| optimize_suppression_idxs | Source code |
| read_coupling_csv | Man page Source code |
| set_model_bounds | Man page Source code |
| set_vector | Source code |
| solve_model | Man page Source code |
| str_to_char | Source code |
| tree_building | Source code |
