GRB_generate_falcon_model: Generate Gurobi falcon model. First generates model in sybil...

In DikshantPradhan/FluxCouplingTools:

Description

Generate Gurobi falcon model. First generates model in sybil then converts the model to Gurobi in order to add additional constraints on flux

Usage

GRB_generate_falcon_model(sybil_model, falcon_model = FALSE,
  r0_gene_set = c(), r0_rxn_set_list = c())

Arguments

sybil_model	base model to build falcon model from
falcon_model	boolean value indicating whether or not the base model has enzyme activity already. If TRUE, then the function will simply add contstraints to the falcon model
r0_gene_set	list of genes passed in to the falcon-model building method (generate_falcon_model)
r0_rxn_set_list	list of reaction sets passed in to the falcon-model building method (generate_falcon_model)

Value

Gurobi model based on metabolic model with enzymatic acctivity

DikshantPradhan/FluxCouplingTools documentation built on Aug. 27, 2019, 2:19 a.m.