GRB_flux_coupling_raptor_wrapper: wrapper function for flux coupling

In DikshantPradhan/FluxCouplingTools:

Description

wrapper function for flux coupling

Usage

GRB_flux_coupling_raptor_wrapper(i, vars, model_og,
  reaction_indexes = 1:length(vars), compare_mtx = FALSE,
  init_coupling_mtx = c(), file_output = NULL)

Arguments

i	integer indicating index of the reaction to suppress
vars	vector of reaction ids
model_og	Gurobi model
reaction_indexes	integers indicating reactions to run flux coupling over; defaults to 1:length(vars)
compare_mtx	boolean to indicate whether or not to couple known sets together if any individual reactions are coupled; FALSE by default
init_coupling_mtx	boolean matrix of known coupling between reactions; empty by default
file_output	filename to output coupling vector to

Value

list of integers which indicate positions of TRUE values in couling matrix

DikshantPradhan/FluxCouplingTools documentation built on Aug. 27, 2019, 2:19 a.m.