Description Usage Arguments Author(s) Examples
View source: R/f.integrate_extracted.R
function to integrate peaks from 3d chromato array
1 2 | f.integrate_extracted(data, channel, negatif = F, correct.baseline = F,
allign = F, start, end, wm = 50, ws = 5, plotting = F)
|
data |
an array as returned by the function f.eat.image |
channel |
numeric for the channel to use (1 for red, 2 for green and 3 for blue) |
negatif |
apply a transformation to put the data in negatif, needed for white light pictures and for some extracted featuress from the network |
correct.baseline |
use or not the rolling ball algorithm to correct the baseline |
start |
starting pixel index |
end |
stopping pixel index |
wm |
Width of local window for minimization/maximization |
ws |
Width of local window for smoothing |
plotting |
should a plot be display to check the integration |
align |
boolean, use or not ptw to align the peak to the first sample |
... |
Arguments to be passed to methods |
Dimitri Fichou
1 2 | data <- f.read.image(source='www/rTLC_demopicture.JPG',height=128)
## incoming
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