Description Usage Arguments Details See Also Examples
This function generates a graphical representation of the specified 'sample.cr´ object.
1 2 |
samp |
object of class 'sample.cr´. |
which.occasion |
specifies the survey occasion from which catches are shown in the output. |
show.sizes |
if TRUE, different animal group sizes are shown as dots of different sizes. |
show.exps |
if TRUE different group exposures are shown in different shading. |
dsf |
enlargement factor for group dots. |
whole.population |
if TRUE undetected animal groups will be black, as well as the detected animal groups in red |
type |
if "locations", the locations of the animals in the survey region is show, elese plots of capute histories are shown |
This function shows which animals/groups were captured on a mark-recatpure survey. It shows a picture of the region and indicates the detected animal groups using red dots. If which.occasion
is set 0 the removals from all occasions are shown.
setpars.survey.cr
, generate.sample.cr
summary.sample.cr
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 | cr.reg<-generate.region(x.length=100, y.width=50)
cr.dens <- generate.density(cr.reg)
cr.poppars<-setpars.population(density.pop = cr.dens, number.groups = 100, size.method = "poisson",
size.min = 1, size.max = 5, size.mean = 1, exposure.method = "beta",
exposure.min = 2, exposure.max = 10, exposure.mean = 3,
exposure.shape = 0.5, type.values = c("Male","Female"),
type.prob = c(0.48,0.52))
cr.pop<-generate.population(cr.poppars)
cr.des<-generate.design.cr(cr.reg, n.occ = 4)
cr.survpars<-setpars.survey.cr(cr.pop, cr.des, pmin.unmarked=0.00001, pmax.unmarked=0.5, improvement=0.01)
cr.samp<-generate.sample.cr(cr.survpars)
plot(cr.samp)
plot(cr.samp,type="locations", whole.population=TRUE, which.occ=0)
plot(cr.samp,type="locations", whole.population=TRUE, which.occ=1)
plot(cr.samp,type="locations", whole.population=TRUE, which.occ=2)
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