geocleaMT: A quick summary guide of geocleaMT package
In Dmirandae/geocleaMT-1: A Package to Clean/Test Georeferenced Data
Description
Although, the functions could be
used in the suggested pipelines, each function is suited to perform an
specific task or a set of them, given the package a high level of
customizability[1]
Functions may be used for performing processes as:
Read input files in Darwin Core format using an R based function [readDbR] or a bash+R function [readDbBash].
Assign elevations to the data set [assignElevation].
Eliminate invasive species [invasiveSp].
Separate occurrences with and without geocode [splitGeoref].
Check decimal degree coordinates format [checkCoord].
Delete duplicated points or points with latitude and longitude assigned as 0.0 [splitGeoref].
Separate land/sea occurrences [pointsAtSea].
Delete points/species outside of a given distribution [spOutPoly].
Separate species with a minimum number of occurrences [usefulSp].
Verify that coordinates are into the range for latitude (-90, 90) and
longitude (-180, 180) [checkCoord].
Eliminate specific records [delPointsOrSp].
Calculate for each species some general descriptors (mean
propinquity, extreme distances) [meanPropinquity].
References
[1] R-Alarcon, V. and Miranda-Esquivel, D.R. (submitted.) geocleaMT : An R package for cleaning/testing geographical data from electronic biodatabases.
Dmirandae/geocleaMT-1 documentation built on Nov. 18, 2019, 6:26 p.m.
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Description
Although, the functions could be used in the suggested pipelines, each function is suited to perform an specific task or a set of them, given the package a high level of customizability[1]
Functions may be used for performing processes as:
Read input files in Darwin Core format using an R based function [readDbR] or a bash+R function [readDbBash].
Assign elevations to the data set [assignElevation].
Eliminate invasive species [invasiveSp].
Separate occurrences with and without geocode [splitGeoref].
Check decimal degree coordinates format [checkCoord].
Delete duplicated points or points with latitude and longitude assigned as 0.0 [splitGeoref].
Separate land/sea occurrences [pointsAtSea].
Delete points/species outside of a given distribution [spOutPoly].
Separate species with a minimum number of occurrences [usefulSp].
Verify that coordinates are into the range for latitude (-90, 90) and
longitude (-180, 180) [checkCoord].
Eliminate specific records [delPointsOrSp].
Calculate for each species some general descriptors (mean
propinquity, extreme distances) [meanPropinquity].
References
[1] R-Alarcon, V. and Miranda-Esquivel, D.R. (submitted.) geocleaMT : An R package for cleaning/testing geographical data from electronic biodatabases.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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