Description Usage Arguments Details Value Note Author(s) References See Also
Separate species categorized as invasive for The Global Invasive Species Information Network (ISSG) [1] and Island Biodiversity and Invasive Species (IBIS) [2].
1 2 3 |
data |
Vector of characters. Name of the input file. |
rd.frmt |
Vector of characters. The file format to read.
By default it will be read as a R object using the
|
path |
Vector of characters. Path to the input file. |
starts.in |
starts.in Numeric vector. Row number to start the process. |
save.Sp.list |
Logic. If |
wrt.frmt |
Vector of characters. Format to save output
file. By default it will be written as a R object using
|
save.foreign.in |
Vector of characters. Path to write the output file with species that are categorized as invasive. |
save.non.foreign.in |
Vector of characters. Path to write the output file with species that are not categorized as invasive. |
save.temp.in |
Vector of characters. Path to the temporal file
as backup of the process. If the process is stopped, the user could reset it
assigning the row number in |
For more details about the formats to read and/or write, see
readAndWrite
function.
If the argument in the save.Sp.list
parameter is 'TRUE'
,
the files will be saved in the path assigned in the path
parameter.
The headers of the input file must follow the Darwin Core standard [3]. The user can see the guide using data('ID_DarwinCore) command.
A table data.frame class with a list of invasive species. A table data.frame class with a list of non-invasive species.
See: R-Alarcon V. and Miranda-Esquivel DR.(submitted) geocleaMT: An R package to cleaning geographical data from electronic biodatabases.
R-Alarcon Viviana and Miranda-Esquivel Daniel R.
[1] Lowe, S. et al. 2000. 100 of the world's worst invasive alien species: A selection from the global invasive species database. The Invasive Species Specialist Group (ISSG) a specialist group of the Species Survival Commission (SSC) of the World Conservation Union (IUCN).
[2] Kells, S. S. and Worswick, C. 1997. An introduction to the IBIS database. Melbourne Institute of Applied Economic and Social Research.
[3] Wieczorek, J. et al. 2012. Darwin core: An evolving community-developed biodiversity data standard. PloS One 7: e29715.
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