PartitionFinder: PartitionFinder 2
In DomBennett/om..partitionfinder: PartitionFinder2

Description Usage Arguments Examples

View source: R/functions.R

Run PartitionFinder 2

1	PartitionFinder(arglist = arglist_get(...), outdir = getwd())

`arglist`	Arguments for PartitionFinder
`outdir`	Filepath to output files are placed

library(outsider)
PartitionFinder <- module_import('PartitionFinder',
                                 repo = 'dombennett/om..partitionfinder')
example_fetch <- module_import('example_fetch',
                               repo = 'dombennett/om..partitionfinder')
# bring PartitionFinder examples to working directory
example_fetch(type = 'nucleotide')
# run on the "nucleotide" example folder
PartitionFinder(arglist = 'nucleotide')