PartitionFinderMorphology: PartitionFinderMorphology 2
In DomBennett/om..partitionfinder: PartitionFinder2

Description Usage Arguments Examples

View source: R/functions.R

Run PartitionFinderMorphology 2

1	PartitionFinderMorphology(arglist = arglist_get(...), outdir = getwd())

`arglist`	Arguments for PartitionFinder
`outdir`	Filepath to output files are placed

library(outsider)
PartitionFinderMorphology <- module_import('PartitionFinderMorphology',
                                 repo = 'dombennett/om..partitionfinder')
example_fetch <- module_import('example_fetch',
                               repo = 'dombennett/om..partitionfinder')
# bring PartitionFinder examples to working directory
example_fetch(type = 'morphology')
# run on the "morphology" example folder
PartitionFinderMorphology(arglist = c('--raxml', 'morphology'))