GenStrucMat: Function to generate structure matrix using ape tree object

In DongyueXie/scca: Sparse Canonical Correlation Analysis - Intergrated Methods

Description

This function takes tree object from ape package as input.

Usage

GenStrucMat(x, tree, p_c = 1, dis = F, p_d = 1, h = 0.1, wcorr = F,
  thresh = 0.5)

Arguments

x:	data matrix
tree:	tree object
p_c:	|r_ij|^p_c
p_d:	d^p_d
dis:	whether distance weighted;
wcorr:	whether using correlation weighted
h:	controls the complexity of structural penalty. Larger h, more complex. h should between 0 and 1.

DongyueXie/scca documentation built on May 29, 2019, 2:37 p.m.