Files in Durenlab/RegNMF
RegNMF
.Rbuildignore
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.Rproj.user/7F78FD47/cpp-compilation-config
.Rproj.user/7F78FD47/cpp-definition-cache
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DESCRIPTION
Integrate_with_Seurat/H.txt
Integrate_with_Seurat/Input_from_seurat.md
Integrate_with_Seurat/barcode_use.txt
Integrate_with_Seurat/reduced_dimension_iput_into_seurat.md
NAMESPACE
R/Fold_RE_TG_multiAdjust.R
R/Fold_RE_TG_multiAdjust.default.R
R/Fold_sim_based_clustering2.R
R/Fold_sim_based_clustering2.default.R
R/RcppExports.R
R/RegNMF.R
R/RegNMF.default.R
R/SplitGroup.R
R/SplitGroup.default.R
R/Visualization.R
R/Visualization.default.R
R/callpeak.R
R/callpeak.default.R
R/clustering.R
R/clustering.default.R
R/defaultpar_coupledNMF.R
R/defaultpar_coupledNMF.default.R
R/demo.R
R/demo.default.R
R/genlouvain.R
R/genlouvain.default.R
R/normlize_scalling.R
R/normlize_scalling.default.R
R/read_ATAC_GEX.R
R/read_ATAC_GEX.default.R
R/tfidf_trans.R
R/tfidf_trans.default.R
README.md
RegNMF.Rproj
inst/include/util.h
man/RegNMF.Rd
man/SplitGroup.Rd
man/Visualization.Rd
man/callpeak.Rd
man/clustering.Rd
man/demo.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/core_code.cpp
src/util.cpp
