EMSL-Computing/pspecterlib: PSpecteR Library - Visualization tools for top-down and bottom-up proteomics data

Provides functionality to visually examine LC-MS top-down and bottom-up proteomics data. Supports reading various mass spectrometry files, labeling spectra with fragmenetation patterns, testing post-translational modifications, plotting where identified fragments map to reference sequences, and visualizing algorithmic output from database search tools (MSPathFinder) and metadata.

Getting started

Package details

AuthorDavid Degnan [aut, cre]
MaintainerDavid Degnan <david.degnan@pnnl.gov>
LicenseMIT + file LICENSE
Version1.1.0
URL https://github.com/emsl-computing/pspecter-lib
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("EMSL-Computing/pspecterlib")
EMSL-Computing/pspecterlib documentation built on Jan. 28, 2024, 8:13 p.m.