count_ion_annotations: Generates a Summary Table of the Number of Ions per Residue

In EMSL-Computing/pspecterlib: PSpecteR Library - Visualization tools for top-down and bottom-up proteomics data

Generates a Summary Table of the Number of Ions per Residue

Description

A simple summary table of the number of ions per residues

Usage

count_ion_annotations(MatchedPeaks, IncludeIsotopes = FALSE)

Arguments

MatchedPeaks	A matched_peaks object generated by get_matched peaks. Required.
IncludeIsotopes	A logical to indicate whether isotopes should be included. Default is FALSE.

Examples

## Not run: 

# Test bottom up data
BU_Peak <- get_peak_data(ScanMetadata = BU_ScanMetadata, ScanNumber = 31728)
BU_Match <- get_matched_peaks(ScanMetadata = BU_ScanMetadata, PeakData = BU_Peak)

count_ion_annotations(MatchedPeaks = BU_Match)


## End(Not run)

EMSL-Computing/pspecterlib documentation built on Jan. 28, 2024, 8:13 p.m.