cleanMeasureCode: Clean the MeasureCode variable

In EU-ECDC/EpiReport: Epidemiological Report

Description

Clean the MeasureCode variable and replace the specific codes with the generic ones
(e.g. ACCUTE.AGE_GENDER.RATE will be replaced by CONFIRMED.AGE_GENDER.RATE)

Usage

cleanMeasureCode(var)

Arguments

var	character string vector variable, variable to clean

Details

• ALL.COUNT will replace the following codes:

  • ALL.DOMESTIC.COUNT

  • AGELT1.COUNT

• ALL.RATE will replace the following codes:

  • ALL.DOMESTIC.AGE.RATE

• ALL.AGE.RATE will replace the following codes:

  • ALL.DOMESTIC.AGE.RATE

• ALL.AGESTANDARDISED.RATE will replace the following codes:

  • ALL.DOMESTIC.AGESTANDARDISED.RATE

• CONFIRMED.COUNT will replace the following codes:

  • ALL.LABCONFIRMED.COUNT

  • CONFIRMED.LABCONFIRMED.COUNT

  • CONFIRMED.AGELT1.COUNT

  • TYPHOID.COUNT

• CONFIRMED.RATE will replace the following codes:

  • CONFIRMED.LABCONFIRMED.RATE

  • CONFIRMED.AGELT1.RATE

  • TYPHOID.RATE

• CONFIRMED.AGESTANDARDISED.RATE will replace the following codes:

  • CONFIRMED.LABCONFIRMED.AGESTANDARDISED.RATE

• CONFIRMED.AGE_GENDER.RATE will replace the following codes:

  • CONFIRMED.LABCONFIRMED.AGE_GENDER.RATE

  • TYPHOID.AGE_GENDER.RATE

  • ACCUTE.AGE_GENDER.RATE

Value

cleaned vector variable

See Also

SALM2016

Examples

x <- EpiReport::SALM2016
x$MeasureCode <- cleanMeasureCode(x$MeasureCode)

EU-ECDC/EpiReport documentation built on Feb. 11, 2021, 6:30 p.m.