runEpiSDApp: Run the EpiSignalDectection 'shiny' application

In EU-ECDC/EpiSignalDetection: Signal Detection Analysis

Description

Run the 'shiny' interactive application for signal detection analysis using ECDC Atlas export data.

Usage

runEpiSDApp()

Details

Datasets to use in the tool:

• Default dataset included in the application (Salmonellosis 2007-2016 or Measles 1999-2018 data);

• External dataset using the "Browse" button in the application:

  • –> An export (csv format) from the ECDC Surveillance Atlas of Infectious Diseases: http://atlas.ecdc.europa.eu/public/index.aspx.

    On the ECDC "Surveillance Atlas of Infectious Diseases" web site:

    • 1- Choose the disease/health topic to analyse

    • 2- Export the data (csv) using the default settings

    • 3- Import the csv in the application

    • 4- You can now explore the disease time series for signal detection...

  • –> Any dataset specified as described in the package vignette.

Examples

# --- Run the 'shiny' app
# --- (NB: please open the app in an external browser
# --- in order to facilitate its use)
runEpiSDApp()

EU-ECDC/EpiSignalDetection documentation built on May 26, 2019, 2:36 a.m.