Man pages for EpidemiologyDVM/Rnets
Resistance Relationship Networks using Graphical LASSO

Assign_EmetadataAssign_Emetadata - Methods for assigning network edge...
Assign_VmetadataAssign_Vmetadata - Methods for assigning network vertex...
Clean_SigmaClean_Sigma function
dot-Assign_Layout_MatrixHidden function for assigning layout matrix
dot-Gen_R.Gen_R - internal methods for generating Rnets.
E_ATTRSSample Edge Attributes
EC_COORDSExample Vertex coordinates
Estimate_pCorrsEstimation of partial correlation matrix from precision...
L1SelectionL1 Selection for Rnets
NARMS_EC_DATAE. coli Isolate information from Nat'l Antimicrobial...
plot-Rnet.basicPlot methods for R-nets
plot-rnetStrataPlot method for rnetStrata class
printPrint methods of rnet objects.
RnetR-net Methods
rnetBasicAn S4 class containg the information of a basic rnet. These...
Rnet_HeatmapRnet_Heatmap - Function to generate a bitmap figure to...
rnetInputAn S4 class for accepting input data common for generating...
rnetMultiStrataAn S4 class containing multiple Rnets, each the information...
rnetStrataAn S4 class containing the information of an rnet...
signedModularityRobust Estimator of modularity (Gomez, et al 2009)
signedModularity-igraphsignedModularity for class(x) = 'igraph'
signedModularity-matrixsignedModularity for class(x) = 'matrix'
signedModularity-rnetBasicsignedModularity for class(x) = 'rnetBasic'
signedModularity-rnetMultiStratasignedModularity for class(x) = 'rnetMultiStrata'
Sq2LMatrix reshaping function
summary-rnetBasicSummary - rnetBasic
summary-rnetStrataSummary - rnetStrata
V_ATTRSSample Vertex Attributes for NARMS_EC_DATA
EpidemiologyDVM/Rnets documentation built on Dec. 8, 2017, 12:27 a.m.