reverse_complement: Reverse and/or complement strings
In EricEdwardBryant/mutagenesis: Mutagenesis
Description
Usage
Arguments
Format
Value
Examples
Description
Given a character vector, returns the reverse, complement, or reverse &
complement of each string as a character vector.
Usage
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reverse_complement(x, from_to = DNA)
reverse(x)
complement(x, from_to = DNA)
DNA
RNA
Arguments
x
[character]
Strings to reverse and/or complement.
from_to
[named:character]
Names and values correspond to letters and their complement. Defaults
to DNA.
Format
DNA - A named character vector. Names and values
correspond to complementary DNA bases.
RNA - A named character vector. Names and values
correspond to complementary RNA bases.
Value
Returns a character vector with the same length as x.
Examples
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dna <- c('ATGATGC', 'AAAGGG')
reverse(dna)
complement(dna)
reverse_complement(dna)
rna <- c('AUGAUGC', 'AAAGGG')
reverse(rna)
complement(rna, RNA)
reverse_complement(rna, RNA)
EricEdwardBryant/mutagenesis documentation built on May 14, 2019, 6:13 p.m.
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Description Usage Arguments Format Value Examples
Description
Given a character vector, returns the reverse, complement, or reverse & complement of each string as a character vector.
Usage
1 2 3 4 5 6 7 8 9 | reverse_complement(x, from_to = DNA)
reverse(x)
complement(x, from_to = DNA)
DNA
RNA
|
Arguments
x |
Strings to reverse and/or complement. |
from_to |
Names and values correspond to letters and their complement. Defaults
to |
Format
DNA - A named character vector. Names and values
correspond to complementary DNA bases.
RNA - A named character vector. Names and values
correspond to complementary RNA bases.
Value
Returns a character vector with the same length as x.
Examples
1 2 3 4 5 6 7 8 9 | dna <- c('ATGATGC', 'AAAGGG')
reverse(dna)
complement(dna)
reverse_complement(dna)
rna <- c('AUGAUGC', 'AAAGGG')
reverse(rna)
complement(rna, RNA)
reverse_complement(rna, RNA)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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