ultm: Convert a phylo object to an inverse distance matrix that...

In Euphrasiologist/VCVglmm: Manipulating model outputs from MCMCglmm and lme4 objects, usually involving variance-covariance matrices

Description

Convert a phylo object to an inverse distance matrix that MCMCglmm understands

Usage

ultm(tree, MPL = FALSE, inverseA = TRUE)

Arguments

tree	tree of class phylo
MPL	logical, should the function compute the mean path length?
inverseA	logical, should the inverse matrix be computed?

Examples

tree <- ape::read.tree("./tree.newick") # newick format
ultm(tree, MPL = FALSE, inverseA = TRUE)

Euphrasiologist/VCVglmm documentation built on June 4, 2020, 7:08 p.m.