edd_plot_mus: Generating line plot of extinction rates of each lineage

In EvoLandEco/eve: Evolution Emulator, phylogenetically dependent

Generating line plot of extinction rates of each lineage

Description

Function to generate a plot showing the transition of extinction rates of each lineage

Usage

edd_plot_mus(
  raw_data = NULL,
  rep_id = 1,
  save_plot = FALSE,
  path = NULL,
  deviation = FALSE,
  annotation = TRUE
)

Arguments

raw_data	a list of results generated by edd simulation function
rep_id	specify the id of replication to plot
save_plot	Logical, whether save to file or return a ggplot object
path	The path to save the plots
deviation	Logical, whether plot the deviation of extinction rates
annotation	Logical, whether plot the annotation of parameters

Value

an ggplot object

Author(s)

Tianjian Qin

EvoLandEco/eve documentation built on Sept. 14, 2024, 12:04 a.m.