PDSfun: A PDSfun Function

Description Usage Arguments Examples

View source: R/PDSfun.r

Description

This function allows you to compute Pathway Desregulation Score deriving make sure that you have the below database for the metabolites and pathway list: meta_path.RData

Usage

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PDSfun(qvec)

Arguments

qvec

This is the Metabolite_pathway_table from MetaTOpathway function. This table includes the metabolites ids and the its corssponding hmdb ids

Examples

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PDSmatrix= PDSfun(Metabolite_pathway_table)
PDSfun(Metabolite_pathway_table)

FADHLyemen/lilikoi_Fadhl documentation built on Aug. 7, 2019, 5:28 a.m.