Description Usage Arguments Examples
View source: R/MetaTOpathway.r
This function allows you to fuzzy matching of your metabolites names with data base consists of more than 20k metabolites. it allows you also to match also among metabloites synanoms. make sure that you have the below two databases for the exact matching: cmpd_db.rda, and syn_nms_db.rda it uses agrap R function This function was modified version of the name.match function in the below link: https://github.com/cangfengzhe/Metabo/blob/master/MetaboAnalyst/website/name_match.R
1 | SetCandidate(query_inx, can_inx)
|
the |
index of unmatched metabolites and the matched metabolites with the best matching score |
1 2 | SetCandidate(query_inx, can_inx)
SetCandidate(query_inx, can_inx)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.