Process: Initializes a FgProcess and holds all information your app...

Description Usage Arguments Value Examples

Description

If you use not default paths for app & data, modify app_dir and data_dir. This will never be necessary when run in an app, but maybe for local development or testing

Usage

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Process(app_dir = DEFAULT_APP_DIR, data_dir = get_data_dir(),
  input_file_mapping = get_input_file_mapping(data_dir))

Arguments

app_dir

the directory where the app is located. Defaults to /app

data_dir

the directory where the data is located. Defaults to /fastgenomics

input_file_mapping

Where to get the mapping from inputs required in the manifest to actual files on disk. If you need to customize this, only override this parameter as a last resort. See get_input_file_mapping to get an idea how to inject this data.

Value

Process

Examples

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fg_process <- Process()

FASTGenomics/fastgenomicsR documentation built on June 26, 2019, 12:38 p.m.