get.genes: Mapping between gene IDs and gene names

In FabianGrammes/Ssa.RefSeq.db: Annotation package for the Salmo salar RefSeq (ICSASG_v2)

Description

Returns A.salmon gene names for gene_ids

Usage

get.genes(x, mode = "short", transcripts = "longest", match = FALSE)

Arguments

x	a character vector of gene IDs f.eks: gene32277:100196482
mode	short/full (default = short) defines how much information you will get
transcripts	longest/all (default = longest) If you want information on all transcripts for each gene or only the longest
match	if TRUE the output will be in the same order as the input and gene_ids without annotation will contain NA values.

Examples

get.genes( c('gene32277:100196482'), mode = 'full' )

FabianGrammes/Ssa.RefSeq.db documentation built on May 6, 2019, 4:09 p.m.