API for FelixErnst/tRNAdbImport
Importing from tRNAdb and mitotRNAdb as GRanges objects
| Global functions | |
|---|---|
| .assemble_args_for_tRNA_db_search | Source code |
| .checkValueValidity | Source code |
| .check_trnadb_granges | Source code |
| .convert_tRNAdb_result_to_GRanges | Source code |
| .extract_data_frame_from_xml_per_page | Source code |
| .extract_page_numbers | Source code |
| .extract_tRNAdb_details_information | Source code |
| .extract_tRNAdb_sequences | Source code |
| .get_name_in_parent | Source code |
| .get_trna_db | Source code |
| .get_trna_db_list | Source code |
| .get_trna_db_list_blast | Source code |
| .get_trna_db_list_page | Source code |
| .get_trna_db_list_sequences | Source code |
| .get_trna_db_result | Source code |
| .get_trna_db_result_detailpage | Source code |
| .get_verbose | Source code |
| .handle_trna_db_connection_error | Source code |
| .has_CCA_end | Source code |
| .is_a_bool | Source code |
| .is_non_empty_character | Source code |
| .is_non_empty_string | Source code |
| .pos_letters | Source code |
| .sanitize_sequences | Source code |
| .sanitize_structures | Source code |
| TRNA_DB_URL | Man page |
| TRNA_DB_URL_MT | Man page |
| import.mttRNAdb | Man page Source code |
| import.mttRNAdb.blast | Man page |
| import.mttRNAdb.id | Man page Source code |
| import.tRNAdb | Man page Source code |
| import.tRNAdb.blast | Man page Source code |
| import.tRNAdb.id | Man page Source code |
| istRNAdbGRanges | Man page |
| istRNAdbGRanges,GRanges-method | Man page |
| open_mtdbID | Man page Source code |
| open_tdbID | Man page Source code |
| tRNAdb2GFF | Man page Source code |
| tRNAdbImport | Man page |
