extract_colData: Return PCA-projected data from a result-list
In FrancisCrickInstitute/DESdemonA: DESeq2 Wrapper For Pre-Specified Analyses
extract_colData R Documentation
Return PCA-projected data from a result-list
Description
Return colData from a result-list
Usage
extract_colData(object, dataset)
Arguments
object
The list of results returned by get_result
dataset
The name of the dataset you want to extract the PC coordinates - optional, and if omitted all datasets will be reported.
Details
Traverse an object returned by get_result, and extract the colData. As the
comparisons and models within a dataset are all based off the same colData,
the return value is aggregated to the level of dataset.
Value
A DataFrame of PC coordinates for each dataset specified
Author(s)
Gavin Kelly
FrancisCrickInstitute/DESdemonA documentation built on Jan. 2, 2023, 8:08 p.m.
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| extract_colData | R Documentation |
Return PCA-projected data from a result-list
Description
Return colData from a result-list
Usage
extract_colData(object, dataset)
Arguments
object |
The list of results returned by get_result |
dataset |
The name of the dataset you want to extract the PC coordinates - optional, and if omitted all datasets will be reported. |
Details
Traverse an object returned by get_result, and extract the colData. As the comparisons and models within a dataset are all based off the same colData, the return value is aggregated to the level of dataset.
Value
A DataFrame of PC coordinates for each dataset specified
Author(s)
Gavin Kelly
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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