guidanceDNA-class: An S4 Class to represent DNA Alignments with Quality Scores

guidanceDNA-classR Documentation

An S4 Class to represent DNA Alignments with Quality Scores

Description

guidanceDNA holds a multiple sequence alignment of DNA together with quality scores for each cell in the alignment.

Slots

msa

An object of class DNAbin.

scores

A matrix of quality scores.

method

A characters string giving the method to derive the quality scores.

msa.method

A character string giving the alignment method

Author(s)

Christoph Heibl

See Also

"guidanceAA"


FranzKrah/rGUIDANCE documentation built on Jan. 27, 2024, 10:42 a.m.