NEWS.md

In FredHutch/VISCfunctions: VISC STP/SRA functions

VISCfunctions 1.2.4

• Suppress warning from get_full_name() when fragile ldapsearch system call fails on Linux and macOS (#96)

VISCfunctions 1.2.3

• Use shorter git hash in reproducibility table (#92)
• Update t-test syntax in unit test expectations to avoid new error message introduced in R >= 4.4 (#89)
• Update instructions for installing vignettes with dependencies (#94)
• Update CI (#91)

VISCfunctions 1.2.2

• Fixed bug in pairwise_test_cont() to properly catch paired comparisons where no paired data points exist.
• Updated get_session_info() test to account for changes in sessioninfo::session_info()
• Removed car dependency

VISCfunctions 1.2.1

• pairwise_test_cor() is now named cor_test_pairs(). The function cor_test_pairs() now returns a data.frame with information on any ties in each variable instead of number of unique values.

VISCfunctions 1.2.0

• New Functions:
• cor_test() for testing between two continuous variable
• cor_test_pairs() for group pairwise correlation testing (i.e. correlating values between all combinations antigens)
• create_step_curve() function for survival curves and other step curves
• mb_results() for Magnitude Breadth curves and calculating Area under the MB curve
• trapz_sorted() for Trapezoidal Integration of messy data
• collapse_group_row() for an alternative to kableExtra::collapse_rows() on long tables
• binom_ci() to supersede wilson_ci()
• Minor Changes:
• Update README file and add NEWS, CONTRIBUTING, and CONDUCT files
• Remove do() examples
• Add geometric mean/median ability in pairwise_test_cont()
• Updated Overview vignette with all additions and changes
• Bug fixes:
• Fixed issue where two_samp_bin_test() could give p>1
• Fixed issue with reproducibility tables in Mac

VISCfunctions 1.1.4

• Minor change to remove devtools dependency

VISCfunctions 1.1.3

• New Functions:
• escape() to easily make latex friendly columns with \ in front of special characters
• wilson_ci() function for Wilson Confident Intervals
• pariwise_test_bin() for pairwise binary testing comparisons (i.e. pairwise group differences in response rates)
• Minor Changes:
• Adding suffix param to stat_paste(). Now easy to add % or something else after each stat, if needed
• Improved documentation and minor fixes to two_samp_cont_test()
• Added vignette for overview of package

VISCfunctions 1.1.2

• New Functions:
• get_full_name() and get_session_info() for supplemental tables in reports
• Minor Changes:
• round_away_0() allows completely NA vectors
• pretty_pvalues() now has for "latex", "pandoc", "html", and "no_markup" output options
• Bug fixes:
• two_samp_bin_test(): Barnard Test now run correctly
• Change in output type in pvalue() from coin package addressed
• Fix versioning to common three digit method

VISCfunctions 1.0/1.1

Initial Package Development

FredHutch/VISCfunctions documentation built on Oct. 14, 2024, 11:33 p.m.