tgrAnnotate: Queries TGR REDCap for dataset annotations

In FredHutch/tgR: TGR Convenience Functions

Description

Queries TGR REDCap for dataset annotations

Usage

tgrAnnotate(DAG = NULL, harmonizedOnly = FALSE, evenEmptyCols = FALSE)

Arguments

DAG	(admin only) A character vector contining the name(s) of the TGR data access group(s) for which to request data, or "all".
harmonizedOnly	(Optional) Whether you want only the annotations that are harmonized across all projects (TRUE) or a complete data set (FALSE, default).
evenEmptyCols	(Optional) Whether you want even the empty fields in your final data frame (TRUE) or if you just want columns where there is at least one value in the resulting dataset (FALSE, default).

Details

Requires setCreds() to have been run successfully.

Value

Returns a long form data frame containing the requested dataset.

Author(s)

Amy Paguirigan

FredHutch/tgR documentation built on Oct. 5, 2021, 8:39 a.m.