validateUpload: Validate a data frame for upload to TGR
In FredHutch/tgR: TGR Convenience Functions
Description
Usage
Arguments
Details
Value
Author(s)
View source: R/prepForUpload.R
Description
Validate a data frame for upload to TGR
Usage
1
validateUpload(dataToValidate)
Arguments
dataToValidate
A data frame containing the data you want to validate for upload.
Note: For a valid dataset to be uploaded to the TGR REDCap, it must have the 'molecular_id' column first.
Details
Requires REDCap credentials to be set in the environment. Does not allow for changes in DAG or marking if an instrument is complete.
Value
A list of results including: ‘assessment' which is the results from REDCapR’s 'validate_for_write' function;
'invalid' which is a data frame including 'molecular_id' that includes columns that are not included in the TGR data dictionary and cannot be uploaded;
and 'valid' which is a data frame suitable for uploading via the Data Import Tool in REDCap after writing it to a csv.
Author(s)
Amy Paguirigan
FredHutch/tgR documentation built on Oct. 5, 2021, 8:39 a.m.
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Description Usage Arguments Details Value Author(s)
View source: R/prepForUpload.R
Description
Validate a data frame for upload to TGR
Usage
1 | validateUpload(dataToValidate)
|
Arguments
dataToValidate |
A data frame containing the data you want to validate for upload. Note: For a valid dataset to be uploaded to the TGR REDCap, it must have the 'molecular_id' column first. |
Details
Requires REDCap credentials to be set in the environment. Does not allow for changes in DAG or marking if an instrument is complete.
Value
A list of results including: ‘assessment' which is the results from REDCapR’s 'validate_for_write' function; 'invalid' which is a data frame including 'molecular_id' that includes columns that are not included in the TGR data dictionary and cannot be uploaded; and 'valid' which is a data frame suitable for uploading via the Data Import Tool in REDCap after writing it to a csv.
Author(s)
Amy Paguirigan
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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