cellClust: Generate cell clusters
In GIS-SP-Group/RCA: RCA: Clustering Single Cell RNAseq Data using Reference Component Analysis
Description
Usage
Arguments
Value
Examples
Description
Hierarchical clustering and dynamic tree cutting.
Usage
1
2
cellClust(obj_in, method = "hclust", deepSplit_wgcna = 1,
min_group_Size_wgcna = 5)
Arguments
obj_in
data object.
method
can only be "hclust" (default).
deepSplit_wgcna
integer value indicating how deep the dendrogram should be cut. Values can be 0, 1 (default), 2, 3 and 4.
min_group_Size_wgcna
integer value indicating the minimum size of the resulting clusters. Default is 5.
Value
data object.
Examples
1
data_obj = cellClust(data_obj);
GIS-SP-Group/RCA documentation built on May 6, 2019, 5:30 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Hierarchical clustering and dynamic tree cutting.
Usage
1 2 | cellClust(obj_in, method = "hclust", deepSplit_wgcna = 1,
min_group_Size_wgcna = 5)
|
Arguments
obj_in |
data object. |
method |
can only be "hclust" (default). |
deepSplit_wgcna |
integer value indicating how deep the dendrogram should be cut. Values can be 0, 1 (default), 2, 3 and 4. |
min_group_Size_wgcna |
integer value indicating the minimum size of the resulting clusters. Default is 5. |
Value
data object.
Examples
1 | data_obj = cellClust(data_obj);
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.