Files in GMOD/JBrowseR
An R Interface to the JBrowse 2 Genome Browser
.Rbuildignore
.eslintrc.cjs
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
.prettierignore
.prettierrc.json
CONTRIBUTING.md
DESCRIPTION
JBrowseR.Rproj
LICENSE.md
NAMESPACE
NEWS.md
PUBLISHING.md
R/JBrowseR.R
R/alignments.R
R/assembly.R
R/data_frame.R
R/feature.R
R/json.R
R/server.R
R/session.R
R/text-index.R
R/theme.R
R/tracks.R
R/utils-pipe.R
R/utils.R
R/variant.R
R/wiggle.R
README.Rmd
README.md
_pkgdown.yml
example_apps/.gitignore
example_apps/basic_usage_with_text_index/app.R
example_apps/bookmarks_demo/README.md
example_apps/bookmarks_demo/app.R
example_apps/deploy.R
example_apps/load_config_json/app.R
example_apps/load_config_json/config.json
example_apps/load_data_frame/app.R
example_apps/skbr3_gene_fusions/app.R
example_apps/using_plugins/app.R
example_apps/using_plugins/config.json
inst/htmlwidgets/JBrowseR.js
inst/htmlwidgets/JBrowseR.js.LICENSE.txt
man/JBrowseR-shiny.Rd
man/JBrowseR.Rd
man/assembly.Rd
man/default_session.Rd
man/figures/README-example-1.png
man/figures/logo.png
man/json_config.Rd
man/pipe.Rd
man/serve_data.Rd
man/text_index.Rd
man/theme.Rd
man/track_alignments.Rd
man/track_data_frame.Rd
man/track_feature.Rd
man/track_variant.Rd
man/track_wiggle.Rd
man/tracks.Rd
package.json
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
srcjs/JBrowseR.tsx
srcjs/components/JsonView.tsx
srcjs/components/View.tsx
srcjs/components/ViewHg19.tsx
srcjs/components/ViewHg38.tsx
srcjs/utils.ts
tests/testthat.R
tests/testthat/test-alignments.R
tests/testthat/test-assembly.R
tests/testthat/test-data_frame.R
tests/testthat/test-feature.R
tests/testthat/test-session.R
tests/testthat/test-text-index.R
tests/testthat/test-theme.R
tests/testthat/test-tracks.R
tests/testthat/test-variant.R
tests/testthat/test-wiggle.R
tsconfig.json
vignettes/.gitignore
vignettes/JBrowseR.Rmd
vignettes/creating-urls.Rmd
vignettes/custom-browser-tutorial.Rmd
vignettes/json-tutorial.Rmd
webpack.config.js
yarn.lock
