NEWS.md

In GMOD/JBrowseR: An R Interface to the JBrowse 2 Genome Browser

JBrowseR 0.10.2

• Updated to @jbrowse/react-linear-genome-view@2.10.0
• Adds support for lzma cram

JBrowseR 0.10.1

• Updated to @jbrowse/react-linear-genome-view@2.6.2
• Updated webpack build and dev dependencies

JBrowseR 0.10.0

• Updated to @jbrowse/react-linear-genome-view@2.5.0
• Updated to webpack 5
• Fixed issue clicking features when running outside of Shiny

JBrowse 0.9.1

• Updated to @jbrowse/react-linear-genome-view@2.0.1
• Added a new function text_index() to provide support for text search.

JBrowseR 0.9.0

• Updated to @jbrowse/react-linear-genome-view@1.4.4
• Fixed the code example for track_wiggle().
• Updated the URL for the hg38 to fix the CORS error from the old source.

JBrowseR 0.8.1

This release consists of updates to the JS side of the package:

• Updated to @jbrowse/react-linear-genome-view@1.3.2. This includes:
• new SVG export feature! 📸
• a fix for better supporting Dialog components in the UI 🔨
• performance improvements 🚀
• better theming support (you can now change the colors of the bases!) 🎨
• Updates the internal React components in the package based on new API changes to the React LGV

There are no changes to the R interface.

JBrowseR 0.8.0

• Added the track_data_frame() track type. This makes it possible to create JB2 tracks directly from R data frames without any files.
• Updated all views to now send Shiny messages to input$selectedFeature recorded what feature was clicked on. Check out the new example app bookmark_app.R for a demo!

JBrowseR 0.7.1

• Updated URLS in Description to reflect new home in GMOD Github organization.
• Updated to @jbrowse/react-linear-genome-view@1.0.4 (fixes issues with Safari and iOS compatibility).

JBrowseR 0.7.0

• Initial package release!

GMOD/JBrowseR documentation built on March 16, 2024, 5:37 p.m.