corInGeneSet: Evaluate mean correlation between residuals in gene set
In GabrielHoffman/zenith: Gene set analysis following differential expression using linear (mixed) modeling with dream
corInGeneSet R Documentation
Evaluate mean correlation between residuals in gene set
Description
Evaluate mean correlation between residuals in gene set based on results from dream
Usage
corInGeneSet(fit, idx, squareCorr = FALSE)
Arguments
fit
result of differential expression with dream
idx
indeces or rownames to extract
squareCorr
compute the mean squared correlation instead
Value
list storing correlation and variance inflation factor
GabrielHoffman/zenith documentation built on March 10, 2024, 11:43 p.m.
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| corInGeneSet | R Documentation |
Evaluate mean correlation between residuals in gene set
Description
Evaluate mean correlation between residuals in gene set based on results from dream
Usage
corInGeneSet(fit, idx, squareCorr = FALSE)
Arguments
fit |
result of differential expression with dream |
idx |
indeces or rownames to extract |
squareCorr |
compute the mean squared correlation instead |
Value
list storing correlation and variance inflation factor
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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