plot_ada: Plotting ancestral area character in space

In GabrielNakamura/Rrodotus: Tools for Historical Biogeography analysis

Plotting ancestral area character in space

Description

Plotting ancestral area character in space

Usage

plot_ada(
  ada.res,
  grid,
  coords,
  resolution,
  patterns = "all",
  color_palette = "SunsetDark",
  projection = "+proj=robin"
)

Arguments

ada.res	An object from ada function
grid	An spatial object containing the cells used to calculate ancestral diversity distribution with ada
coords	A two column matrix containing the values of Longitude (first column) and Latitude (second column)
resolution	Scalar informing the resolution of grids in grid object
patterns	Character, a vector containing the names of the metrics to be spatialized or "all" to create a map for all metrics. The characters allowed to be passed are "rich", "Nnodes", "PeakDiv", "Skewness", "LowDistPeak", "HighDistPeak", "PeakRange". Default is "all"
color_palette	Character indicating the palette to be used to plot spatial patterns. it can be one of the option present in scale_fill_carto_c function. Default is "SunsetDark"
projection	Character indicating the projection to be used in spatial plots. Default is "+proj=robin"

Value

A list containing spatial plots for the metrics calculated in ada.res

GabrielNakamura/Rrodotus documentation built on Aug. 31, 2023, 2:13 p.m.