accessors-methods: Accessors

In GaelleLefort/ASICS: Automatic Statistical Identification in Complex Spectra

Description

List of available accessors for each slot of all S4 classes present in the package.

Usage

## S4 method for signature 'Spectra'
getSampleName(object)

## S4 method for signature 'Spectra'
getPpmGrid(object)

## S4 method for signature 'Spectra'
getSpectra(object)

## S4 method for signature 'Spectra'
getNormMethod(object)

## S4 method for signature 'Spectra'
getNormParams(object)

## S4 method for signature 'ASICSResults'
getReconstructedSpectra(object)

## S4 method for signature 'ASICSResults'
getQuantification(object)

## S4 method for signature 'ASICSResults'
getDeformedLibrary(object)

## S4 method for signature 'AnalysisResults'
getTypeAnalysis(object)

## S4 method for signature 'AnalysisResults'
getTypeData(object)

## S4 method for signature 'AnalysisResults'
getDataset(object)

## S4 method for signature 'AnalysisResults'
getResults(object)

## S4 method for signature 'AnalysisResults'
getBestModel(object)

## S4 method for signature 'AnalysisResults'
getCVError(object)

## S4 method for signature 'AnalysisResults'
getMeanByGroup(object)

## S4 method for signature 'PureLibrary'
getNbProtons(object)

Arguments

object

An object of class Spectra, PureLibrary, ASICSResults or AnalysisResults.

Value

The wanted accessor

Examples

# Import data and create object
current_path <- file.path(system.file("extdata", package = "ASICS"),
                          "spectra_example.txt")
spectra_data <- read.table(current_path, header = TRUE, row.names = 1)
spectra_obj <- createSpectra(spectra_data)

# Sample names
getSampleName(spectra_obj)
# Spectra
getSpectra(spectra_obj)

GaelleLefort/ASICS documentation built on July 19, 2020, 2:08 p.m.